Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC116165.1-201ENST00000611806 668 ntBASIC20.9■□□□□ 0.94
RC3H1Q5TC82 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RC3H1Q5TC82 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RC3H1Q5TC82 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RC3H1Q5TC82 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.89■□□□□ 0.94
RC3H1Q5TC82 AL589702.1-201ENST00000641229 1509 ntBASIC20.89■□□□□ 0.94
RC3H1Q5TC82 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RC3H1Q5TC82 AC008764.6-201ENST00000595909 2069 ntBASIC20.89■□□□□ 0.93
RC3H1Q5TC82 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 CTBP2P3-201ENST00000585629 1255 ntBASIC20.89■□□□□ 0.93
RC3H1Q5TC82 AL512343.1-201ENST00000605837 169 ntBASIC20.89■□□□□ 0.93
RC3H1Q5TC82 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.89■□□□□ 0.93
RC3H1Q5TC82 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.88■□□□□ 0.93
RC3H1Q5TC82 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 TTTY23B-201ENST00000442790 549 ntBASIC20.88■□□□□ 0.93
RC3H1Q5TC82 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 AL139011.1-202ENST00000642063 584 ntBASIC20.88■□□□□ 0.93
RC3H1Q5TC82 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RC3H1Q5TC82 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
RC3H1Q5TC82 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.86■□□□□ 0.93
RC3H1Q5TC82 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms