Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 AC113347.1-201ENST00000413321 391 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ACTG1P4-201ENST00000425123 1122 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 TSPY22P-201ENST00000427496 604 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 SPDYE13P-201ENST00000445314 798 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 AC090616.6-201ENST00000582640 721 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 IGHV3-41-201ENST00000613121 348 ntBASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC00242Q5T6M2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 TERF1P1-201ENST00000311003 1181 ntBASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 AL139011.1-202ENST00000642063 584 ntBASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 PKD1P5-201ENST00000532415 10291 ntBASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00242Q5T6M2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 KRT8P49-201ENST00000604166 1432 ntBASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00242Q5T6M2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms