Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRYP6-201ENST00000514804 343 ntBASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 LINC02560-201ENST00000596379 459 ntBASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 AC003101.2-201ENST00000612557 442 ntBASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 AC018529.1-201ENST00000613063 361 ntBASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM1Q2M3G4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AC012313.1-201ENST00000593393 3059 ntBASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AF228730.6-201ENST00000641497 218 ntBASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AC084121.3-201ENST00000641716 218 ntBASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 AC105233.6-201ENST00000642093 218 ntBASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM1Q2M3G4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AC100757.3-201ENST00000622361 1406 ntBASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 BANF1P1-201ENST00000553684 263 ntBASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 AL138828.2-201ENST00000615812 383 ntBASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM1Q2M3G4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.45■□□□□ 0.7
SHROOM1Q2M3G4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms