Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.6□□□□□ -0.23
CX3CL1P78423 TPM4P1-201ENST00000436100 807 ntBASIC13.6□□□□□ -0.23
CX3CL1P78423 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.6□□□□□ -0.23
CX3CL1P78423 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC124947.2-201ENST00000547118 1133 ntBASIC13.6□□□□□ -0.23
CX3CL1P78423 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.6□□□□□ -0.23
CX3CL1P78423 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC006557.2-201ENST00000592985 1240 ntBASIC13.6□□□□□ -0.23
CX3CL1P78423 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.6□□□□□ -0.23
CX3CL1P78423 AL031008.1-201ENST00000619963 541 ntBASIC13.6□□□□□ -0.23
CX3CL1P78423 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CX3CL1P78423 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.6□□□□□ -0.23
CX3CL1P78423 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CX3CL1P78423 AC103702.1-201ENST00000548801 2630 ntBASIC13.6□□□□□ -0.23
CX3CL1P78423 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 AL160237.2-201ENST00000556165 472 ntBASIC13.59□□□□□ -0.23
CX3CL1P78423 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.59□□□□□ -0.23
CX3CL1P78423 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CX3CL1P78423 FRMD8P1-201ENST00000440433 1524 ntBASIC13.59□□□□□ -0.23
CX3CL1P78423 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CX3CL1P78423 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CX3CL1P78423 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CX3CL1P78423 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CX3CL1P78423 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CX3CL1P78423 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CX3CL1P78423 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CX3CL1P78423 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.58□□□□□ -0.23
CX3CL1P78423 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CX3CL1P78423 LINC02199-201ENST00000506655 2702 ntBASIC13.58□□□□□ -0.24
CX3CL1P78423 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 AC008741.2-201ENST00000612792 3115 ntBASIC13.58□□□□□ -0.24
CX3CL1P78423 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CX3CL1P78423 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CX3CL1P78423 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.58□□□□□ -0.24
CX3CL1P78423 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CX3CL1P78423 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CX3CL1P78423 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms