Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H3AP68431 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 KRT8P39-201ENST00000396270 1433 ntBASIC14.7□□□□□ -0.06
HIST1H3AP68431 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 RNA5SP419-201ENST00000515908 135 ntBASIC14.7□□□□□ -0.06
HIST1H3AP68431 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 OR7E47P-204ENST00000575924 449 ntBASIC14.7□□□□□ -0.06
HIST1H3AP68431 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 AL773604.1-201ENST00000617417 272 ntBASIC14.7□□□□□ -0.06
HIST1H3AP68431 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
HIST1H3AP68431 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 PCDHB19P-201ENST00000570871 2371 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 UBALD1-205ENST00000590891 2641 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 MRPL20P1-201ENST00000400819 433 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 AL031284.1-201ENST00000419297 478 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CYP2A7P1-201ENST00000595391 815 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 MIR7706-201ENST00000613747 67 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 OR6D1P-203ENST00000641209 4860 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 AL512652.2-201ENST00000625156 1716 ntBASIC14.69□□□□□ -0.06
HIST1H3AP68431 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.69□□□□□ -0.06
HIST1H3AP68431 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HIST1H3AP68431 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.68□□□□□ -0.06
HIST1H3AP68431 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HIST1H3AP68431 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms