Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRA2BP62995 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.85■□□□□ 0.13
TRA2BP62995 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.85■□□□□ 0.13
TRA2BP62995 VN2R19P-201ENST00000442399 1052 ntBASIC15.85■□□□□ 0.13
TRA2BP62995 AC009947.1-201ENST00000444350 727 ntBASIC15.85■□□□□ 0.13
TRA2BP62995 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 IGHV3-22-201ENST00000520721 359 ntBASIC15.85■□□□□ 0.13
TRA2BP62995 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.85■□□□□ 0.13
TRA2BP62995 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 ACTL9-202ENST00000612068 1252 ntBASIC15.85■□□□□ 0.13
TRA2BP62995 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.85■□□□□ 0.13
TRA2BP62995 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRA2BP62995 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.85■□□□□ 0.13
TRA2BP62995 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 ME2P1-201ENST00000426028 1970 ntBASIC15.85■□□□□ 0.13
TRA2BP62995 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.85■□□□□ 0.13
TRA2BP62995 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.85■□□□□ 0.13
TRA2BP62995 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.85■□□□□ 0.13
TRA2BP62995 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRA2BP62995 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRA2BP62995 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 CRYGEP-201ENST00000412192 528 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.84■□□□□ 0.13
TRA2BP62995 RNA5SP415-201ENST00000517246 115 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.84■□□□□ 0.13
TRA2BP62995 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.84■□□□□ 0.13
TRA2BP62995 AL645728.2-201ENST00000641974 660 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 UBALD1-205ENST00000590891 2641 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 HLA-A-201ENST00000376802 1334 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.84■□□□□ 0.13
TRA2BP62995 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.84■□□□□ 0.13
TRA2BP62995 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRA2BP62995 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
TRA2BP62995 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.84■□□□□ 0.13
TRA2BP62995 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TRA2BP62995 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.84■□□□□ 0.13
TRA2BP62995 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRA2BP62995 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRA2BP62995 AL031731.1-201ENST00000642131 2094 ntBASIC15.83■□□□□ 0.13
TRA2BP62995 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRA2BP62995 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRA2BP62995 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TRA2BP62995 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRA2BP62995 AL671710.1-201ENST00000610245 2349 ntBASIC15.83■□□□□ 0.12
TRA2BP62995 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
TRA2BP62995 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRA2BP62995 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.83■□□□□ 0.12
TRA2BP62995 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.83■□□□□ 0.12
TRA2BP62995 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.83■□□□□ 0.12
TRA2BP62995 AC079776.4-201ENST00000511039 504 ntBASIC15.83■□□□□ 0.12
TRA2BP62995 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRA2BP62995 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.83■□□□□ 0.12
TRA2BP62995 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRA2BP62995 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRA2BP62995 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.83■□□□□ 0.12
TRA2BP62995 GGT4P-201ENST00000623672 1708 ntBASIC15.82■□□□□ 0.12
TRA2BP62995 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRA2BP62995 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRA2BP62995 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms