Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
ATXN3P54252 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.24■□□□□ 0.35
ATXN3P54252 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 FAM58CP-201ENST00000435741 640 ntBASIC17.24■□□□□ 0.35
ATXN3P54252 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.24■□□□□ 0.35
ATXN3P54252 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.24■□□□□ 0.35
ATXN3P54252 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.24■□□□□ 0.35
ATXN3P54252 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.24■□□□□ 0.35
ATXN3P54252 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ATXN3P54252 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.24■□□□□ 0.35
ATXN3P54252 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATXN3P54252 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATXN3P54252 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
ATXN3P54252 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 KRT18P55-202ENST00000578578 1546 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATXN3P54252 AL035633.1-201ENST00000406139 838 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
ATXN3P54252 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.23■□□□□ 0.35
ATXN3P54252 AL031432.2-201ENST00000566714 459 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 AL928711.1-201ENST00000570165 459 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 AC004835.2-201ENST00000603762 682 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.23■□□□□ 0.35
ATXN3P54252 AC007064.4-201ENST00000637740 555 ntBASIC17.23■□□□□ 0.35
ATXN3P54252 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATXN3P54252 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATXN3P54252 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
ATXN3P54252 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATXN3P54252 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 AC046158.3-201ENST00000624947 2558 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ATXN3P54252 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATXN3P54252 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.22■□□□□ 0.35
ATXN3P54252 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.22■□□□□ 0.35
ATXN3P54252 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.22■□□□□ 0.35
ATXN3P54252 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATXN3P54252 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.22■□□□□ 0.35
ATXN3P54252 SPCS2P1-201ENST00000561636 679 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 AC096734.2-201ENST00000562054 433 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 AC027612.4-201ENST00000605371 583 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.22■□□□□ 0.35
ATXN3P54252 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATXN3P54252 GGTLC5P-201ENST00000617623 998 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ATXN3P54252 AL353593.2-201ENST00000602529 1483 ntBASIC17.22■□□□□ 0.35
ATXN3P54252 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
ATXN3P54252 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATXN3P54252 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms