Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC141586.5-201ENST00000624546 2050 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.56□□□□□ -0.08
HCFC1P51610 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HCFC1P51610 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HCFC1P51610 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HCFC1P51610 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
HCFC1P51610 AL512638.1-201ENST00000457493 794 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.56□□□□□ -0.08
HCFC1P51610 CYP2A7P1-201ENST00000595391 815 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.56□□□□□ -0.08
HCFC1P51610 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.56□□□□□ -0.08
HCFC1P51610 TEX28P1-201ENST00000613479 1221 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 TEX28P2-201ENST00000617764 1221 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 AL138688.1-201ENST00000624851 1594 ntBASIC14.56□□□□□ -0.08
HCFC1P51610 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HCFC1P51610 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HCFC1P51610 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HCFC1P51610 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 GK-202ENST00000378941 458 ntTSL 3 BASIC14.55□□□□□ -0.08
HCFC1P51610 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.55□□□□□ -0.08
HCFC1P51610 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.55□□□□□ -0.08
HCFC1P51610 AC003101.2-201ENST00000612557 442 ntBASIC14.55□□□□□ -0.08
HCFC1P51610 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 AL021920.2-201ENST00000624828 1351 ntBASIC14.55□□□□□ -0.08
HCFC1P51610 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCFC1P51610 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.55□□□□□ -0.08
HCFC1P51610 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.55□□□□□ -0.08
HCFC1P51610 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.55□□□□□ -0.08
HCFC1P51610 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
HCFC1P51610 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.54□□□□□ -0.08
HCFC1P51610 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 AC009477.1-201ENST00000452936 217 ntBASIC14.54□□□□□ -0.08
HCFC1P51610 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.54□□□□□ -0.08
HCFC1P51610 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 AL008721.1-201ENST00000609964 604 ntBASIC14.54□□□□□ -0.08
HCFC1P51610 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HCFC1P51610 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 FRMD8P1-201ENST00000440433 1524 ntBASIC14.54□□□□□ -0.08
HCFC1P51610 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.54□□□□□ -0.08
HCFC1P51610 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.54□□□□□ -0.08
HCFC1P51610 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.54□□□□□ -0.08
HCFC1P51610 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.54□□□□□ -0.08
HCFC1P51610 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.54□□□□□ -0.08
HCFC1P51610 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.54□□□□□ -0.08
HCFC1P51610 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.54□□□□□ -0.08
HCFC1P51610 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.54□□□□□ -0.08
HCFC1P51610 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCFC1P51610 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms