Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.67■□□□□ 0.74
MRE11P49959 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MRE11P49959 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.66■□□□□ 0.74
MRE11P49959 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
MRE11P49959 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MRE11P49959 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 AC073347.1-201ENST00000421633 2643 ntBASIC19.66■□□□□ 0.74
MRE11P49959 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.66■□□□□ 0.74
MRE11P49959 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
MRE11P49959 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MRE11P49959 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.66■□□□□ 0.74
MRE11P49959 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.66■□□□□ 0.74
MRE11P49959 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.66■□□□□ 0.74
MRE11P49959 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.66■□□□□ 0.74
MRE11P49959 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MRE11P49959 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MRE11P49959 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
MRE11P49959 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.65■□□□□ 0.74
MRE11P49959 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MRE11P49959 AL590627.1-203ENST00000421194 1026 ntBASIC19.65■□□□□ 0.74
MRE11P49959 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.65■□□□□ 0.74
MRE11P49959 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.65■□□□□ 0.74
MRE11P49959 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
MRE11P49959 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MRE11P49959 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MRE11P49959 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MRE11P49959 AF228730.7-201ENST00000641842 219 ntBASIC19.65■□□□□ 0.74
MRE11P49959 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MRE11P49959 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
MRE11P49959 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MRE11P49959 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.65■□□□□ 0.74
MRE11P49959 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
MRE11P49959 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
MRE11P49959 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MRE11P49959 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
MRE11P49959 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.64■□□□□ 0.74
MRE11P49959 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
MRE11P49959 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MRE11P49959 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.64■□□□□ 0.73
MRE11P49959 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms