Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
MMP13P45452 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.53■□□□□ 0.4
MMP13P45452 AC018712.1-201ENST00000455767 687 ntBASIC17.53■□□□□ 0.4
MMP13P45452 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 OR7E14P-202ENST00000530490 1290 ntBASIC17.53■□□□□ 0.4
MMP13P45452 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 AL160237.2-201ENST00000556165 472 ntBASIC17.53■□□□□ 0.4
MMP13P45452 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.53■□□□□ 0.4
MMP13P45452 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.53■□□□□ 0.4
MMP13P45452 AC107918.4-202ENST00000641623 219 ntBASIC17.53■□□□□ 0.4
MMP13P45452 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MMP13P45452 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MMP13P45452 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
MMP13P45452 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
MMP13P45452 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP13P45452 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MMP13P45452 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MMP13P45452 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
MMP13P45452 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP13P45452 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP13P45452 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.52■□□□□ 0.4
MMP13P45452 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP13P45452 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP13P45452 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.52■□□□□ 0.4
MMP13P45452 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
MMP13P45452 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.52■□□□□ 0.4
MMP13P45452 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.52■□□□□ 0.4
MMP13P45452 AC004706.3-202ENST00000621574 984 ntBASIC17.52■□□□□ 0.4
MMP13P45452 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MMP13P45452 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
MMP13P45452 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MMP13P45452 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
MMP13P45452 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.52■□□□□ 0.39
MMP13P45452 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP13P45452 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP13P45452 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP13P45452 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MMP13P45452 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
MMP13P45452 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MMP13P45452 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MMP13P45452 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.51■□□□□ 0.39
MMP13P45452 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP13P45452 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.51■□□□□ 0.39
MMP13P45452 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.51■□□□□ 0.39
MMP13P45452 AC006557.2-201ENST00000592985 1240 ntBASIC17.51■□□□□ 0.39
MMP13P45452 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MMP13P45452 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MMP13P45452 AC024909.3-201ENST00000611513 2257 ntBASIC17.51■□□□□ 0.39
MMP13P45452 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
MMP13P45452 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MMP13P45452 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MMP13P45452 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MMP13P45452 GPR89P-201ENST00000407924 1495 ntBASIC17.5■□□□□ 0.39
MMP13P45452 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MMP13P45452 AL590787.1-201ENST00000568856 1315 ntBASIC17.5■□□□□ 0.39
MMP13P45452 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MMP13P45452 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms