Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CLCN1P35523 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN1P35523 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN1P35523 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN1P35523 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLCN1P35523 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN1P35523 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN1P35523 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCN1P35523 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCN1P35523 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCN1P35523 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN1P35523 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCN1P35523 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN1P35523 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN1P35523 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN1P35523 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN1P35523 RNF126P1-202ENST00000569893 925 ntBASIC19.17■□□□□ 0.66
CLCN1P35523 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCN1P35523 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCN1P35523 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CLCN1P35523 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCN1P35523 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLCN1P35523 KRT8P47-201ENST00000604727 1398 ntBASIC19.17■□□□□ 0.66
CLCN1P35523 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCN1P35523 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCN1P35523 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CLCN1P35523 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCN1P35523 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 AL353692.3-201ENST00000407031 1396 ntBASIC19.16■□□□□ 0.66
CLCN1P35523 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCN1P35523 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLCN1P35523 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCN1P35523 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLCN1P35523 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 AC010491.1-201ENST00000563101 2797 ntBASIC19.15■□□□□ 0.66
CLCN1P35523 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.15■□□□□ 0.66
CLCN1P35523 KRT18P21-201ENST00000515767 1272 ntBASIC19.15■□□□□ 0.66
CLCN1P35523 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.15■□□□□ 0.66
CLCN1P35523 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.15■□□□□ 0.66
CLCN1P35523 AC005332.3-201ENST00000589904 676 ntBASIC19.15■□□□□ 0.66
CLCN1P35523 GPR32P1-201ENST00000601788 811 ntBASIC19.15■□□□□ 0.66
CLCN1P35523 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 AC009154.2-201ENST00000621177 724 ntBASIC19.15■□□□□ 0.66
CLCN1P35523 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLCN1P35523 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CLCN1P35523 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms