Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CKS2P33552 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 AC009947.2-201ENST00000444014 672 ntBASIC12.42□□□□□ -0.42
CKS2P33552 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.42□□□□□ -0.42
CKS2P33552 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.42□□□□□ -0.42
CKS2P33552 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CKS2P33552 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CKS2P33552 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CKS2P33552 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 FRMD8P1-201ENST00000440433 1524 ntBASIC12.42□□□□□ -0.42
CKS2P33552 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CKS2P33552 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 GPR89P-201ENST00000407924 1495 ntBASIC12.41□□□□□ -0.42
CKS2P33552 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.41□□□□□ -0.42
CKS2P33552 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 AC096633.1-201ENST00000422446 749 ntBASIC12.41□□□□□ -0.42
CKS2P33552 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.41□□□□□ -0.42
CKS2P33552 AC128676.1-201ENST00000454392 318 ntBASIC12.41□□□□□ -0.42
CKS2P33552 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.41□□□□□ -0.42
CKS2P33552 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
CKS2P33552 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 AC010653.2-201ENST00000623505 997 ntBASIC12.41□□□□□ -0.42
CKS2P33552 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.41□□□□□ -0.42
CKS2P33552 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CKS2P33552 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms