Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
LSP1P33241 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.92■□□□□ 0.3
LSP1P33241 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSP1P33241 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 LINC02447-202ENST00000501888 2146 ntBASIC16.91■□□□□ 0.3
LSP1P33241 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LSP1P33241 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.91■□□□□ 0.3
LSP1P33241 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.91■□□□□ 0.3
LSP1P33241 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 AC026748.1-201ENST00000624349 3251 ntBASIC16.91■□□□□ 0.3
LSP1P33241 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
LSP1P33241 AC097374.2-201ENST00000618617 1306 ntBASIC16.91■□□□□ 0.3
LSP1P33241 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LSP1P33241 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 GGT3P-204ENST00000453783 1664 ntBASIC16.91■□□□□ 0.3
LSP1P33241 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSP1P33241 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.91■□□□□ 0.3
LSP1P33241 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.91■□□□□ 0.3
LSP1P33241 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LSP1P33241 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 CICP24-201ENST00000605464 2705 ntBASIC16.9■□□□□ 0.3
LSP1P33241 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.9■□□□□ 0.3
LSP1P33241 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LSP1P33241 CCR12P-201ENST00000446203 998 ntBASIC16.9■□□□□ 0.3
LSP1P33241 MTCL1P1-201ENST00000446207 792 ntBASIC16.9■□□□□ 0.3
LSP1P33241 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.9■□□□□ 0.3
LSP1P33241 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.9■□□□□ 0.3
LSP1P33241 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LSP1P33241 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LSP1P33241 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.9■□□□□ 0.3
LSP1P33241 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LSP1P33241 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSP1P33241 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSP1P33241 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms