Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHMP24386 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.78■□□□□ 0.12
CHMP24386 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
CHMP24386 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.78■□□□□ 0.12
CHMP24386 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.78■□□□□ 0.12
CHMP24386 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.78■□□□□ 0.12
CHMP24386 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 CYP2T1P-202ENST00000641596 2535 ntBASIC15.78■□□□□ 0.12
CHMP24386 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHMP24386 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHMP24386 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CHMP24386 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHMP24386 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CHMP24386 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CHMP24386 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CHMP24386 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CHMP24386 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.77■□□□□ 0.12
CHMP24386 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 BX005266.1-201ENST00000473402 457 ntBASIC15.77■□□□□ 0.12
CHMP24386 RNA5SP419-201ENST00000515908 135 ntBASIC15.77■□□□□ 0.12
CHMP24386 OR7E14P-202ENST00000530490 1290 ntBASIC15.77■□□□□ 0.12
CHMP24386 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.77■□□□□ 0.12
CHMP24386 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.77■□□□□ 0.12
CHMP24386 AC025062.2-201ENST00000605477 670 ntBASIC15.77■□□□□ 0.12
CHMP24386 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHMP24386 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 AC009336.1-201ENST00000608941 1553 ntBASIC15.77■□□□□ 0.11
CHMP24386 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CHMP24386 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.77■□□□□ 0.11
CHMP24386 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.11
CHMP24386 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHMP24386 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 EGFEM1P-202ENST00000431685 1563 ntBASIC15.76■□□□□ 0.11
CHMP24386 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms