Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TOP3BP1-201ENST00000420768 1380 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFSF4P23510 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFSF4P23510 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TNFSF4P23510 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TNFSF4P23510 KRT8P49-201ENST00000604166 1432 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFSF4P23510 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFSF4P23510 PMS2P7-201ENST00000506558 1336 ntBASIC14.41□□□□□ -0.1
TNFSF4P23510 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
TNFSF4P23510 MIR574-201ENST00000385209 96 ntBASIC14.4□□□□□ -0.1
TNFSF4P23510 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 AC096734.2-201ENST00000562054 433 ntBASIC14.4□□□□□ -0.1
TNFSF4P23510 AC091167.2-201ENST00000579581 588 ntBASIC14.4□□□□□ -0.1
TNFSF4P23510 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TNFSF4P23510 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.4□□□□□ -0.1
TNFSF4P23510 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFSF4P23510 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TNFSF4P23510 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFSF4P23510 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AL353732.1-201ENST00000569618 1459 ntBASIC14.39□□□□□ -0.11
TNFSF4P23510 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TNFSF4P23510 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFSF4P23510 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AL513480.1-201ENST00000451731 511 ntBASIC14.39□□□□□ -0.11
TNFSF4P23510 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TNFSF4P23510 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFSF4P23510 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
TNFSF4P23510 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AC040169.1-201ENST00000565382 521 ntBASIC14.39□□□□□ -0.11
TNFSF4P23510 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFSF4P23510 AC023141.13-201ENST00000604991 943 ntBASIC14.39□□□□□ -0.11
TNFSF4P23510 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFSF4P23510 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFSF4P23510 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms