Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP8P22894 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP8P22894 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP8P22894 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MMP8P22894 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP8P22894 AC079776.4-201ENST00000511039 504 ntBASIC17.65■□□□□ 0.42
MMP8P22894 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP8P22894 AL121894.2-201ENST00000602977 491 ntBASIC17.65■□□□□ 0.42
MMP8P22894 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP8P22894 Z83851.2-201ENST00000609564 659 ntBASIC17.65■□□□□ 0.42
MMP8P22894 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP8P22894 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
MMP8P22894 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.65■□□□□ 0.42
MMP8P22894 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP8P22894 AL662844.4-201ENST00000606367 2838 ntBASIC17.65■□□□□ 0.42
MMP8P22894 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP8P22894 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP8P22894 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.42
MMP8P22894 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MMP8P22894 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MMP8P22894 AC005052.1-201ENST00000625181 2492 ntBASIC17.64■□□□□ 0.42
MMP8P22894 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MMP8P22894 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP8P22894 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.64■□□□□ 0.41
MMP8P22894 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP8P22894 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP8P22894 AC145285.3-201ENST00000564603 959 ntBASIC17.64■□□□□ 0.41
MMP8P22894 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP8P22894 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP8P22894 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MMP8P22894 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
MMP8P22894 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
MMP8P22894 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 CRYGEP-201ENST00000412192 528 ntBASIC17.63■□□□□ 0.41
MMP8P22894 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MMP8P22894 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms