Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AL139384.1-201ENST00000612143 3047 ntBASIC17.81■□□□□ 0.44
CHRNB2P17787 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNB2P17787 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB2P17787 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB2P17787 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
CHRNB2P17787 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB2P17787 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB2P17787 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB2P17787 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB2P17787 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHRNB2P17787 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHRNB2P17787 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 CICP6-201ENST00000457191 2729 ntBASIC17.8■□□□□ 0.44
CHRNB2P17787 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
CHRNB2P17787 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 FAM185BP-201ENST00000443595 716 ntBASIC17.8■□□□□ 0.44
CHRNB2P17787 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CHRNB2P17787 AC087641.1-201ENST00000557561 1021 ntBASIC17.8■□□□□ 0.44
CHRNB2P17787 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 SLC25A6P4-201ENST00000586535 553 ntBASIC17.8■□□□□ 0.44
CHRNB2P17787 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB2P17787 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 AC046158.3-201ENST00000624947 2558 ntBASIC17.8■□□□□ 0.44
CHRNB2P17787 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB2P17787 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB2P17787 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 AC098831.1-202ENST00000438821 336 ntBASIC17.79■□□□□ 0.44
CHRNB2P17787 AC009078.2-202ENST00000463353 338 ntBASIC17.79■□□□□ 0.44
CHRNB2P17787 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.79■□□□□ 0.44
CHRNB2P17787 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNB2P17787 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRNB2P17787 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHRNB2P17787 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms