Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 HYMAI-201ENST00000635591 3347 ntBASIC14.31□□□□□ -0.12
HIST1H1DP16402 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AL596087.1-201ENST00000400979 1969 ntBASIC14.31□□□□□ -0.12
HIST1H1DP16402 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC022616.7-201ENST00000525383 220 ntBASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AP005901.3-202ENST00000581653 237 ntBASIC14.3□□□□□ -0.12
HIST1H1DP16402 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC097637.2-201ENST00000624096 1997 ntBASIC14.3□□□□□ -0.12
HIST1H1DP16402 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H1DP16402 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H1DP16402 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 INTS4P1-201ENST00000438455 1935 ntBASIC14.29□□□□□ -0.12
HIST1H1DP16402 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H1DP16402 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H1DP16402 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms