Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 AC079328.2-201ENST00000561241 3354 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
CAPN1P07384 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 SPDYE21P-201ENST00000413323 827 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 AL020989.1-201ENST00000422979 469 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 SIGLEC30P-201ENST00000455569 941 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 AC105339.3-201ENST00000560043 636 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 AC034105.1-201ENST00000563488 319 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.61■□□□□ 0.25
CAPN1P07384 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 AL022326.1-202ENST00000641533 845 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.61■□□□□ 0.25
CAPN1P07384 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CAPN1P07384 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CAPN1P07384 ZNF259P1-201ENST00000407656 1365 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 AC104109.2-201ENST00000602919 1418 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.61■□□□□ 0.25
CAPN1P07384 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CAPN1P07384 AP002414.3-201ENST00000589352 1468 ntBASIC16.61■□□□□ 0.25
CAPN1P07384 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.6■□□□□ 0.25
CAPN1P07384 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CAPN1P07384 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPN1P07384 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CAPN1P07384 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.6■□□□□ 0.25
CAPN1P07384 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 LAGE3P1-201ENST00000425356 484 ntBASIC16.6■□□□□ 0.25
CAPN1P07384 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPN1P07384 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPN1P07384 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.6■□□□□ 0.25
CAPN1P07384 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.6■□□□□ 0.25
CAPN1P07384 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CAPN1P07384 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CAPN1P07384 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.6■□□□□ 0.25
CAPN1P07384 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN1P07384 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 PCDHB17P-201ENST00000539533 2393 ntBASIC16.59■□□□□ 0.25
CAPN1P07384 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CAPN1P07384 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN1P07384 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN1P07384 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.59■□□□□ 0.25
CAPN1P07384 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 RNA5SP415-201ENST00000517246 115 ntBASIC16.59■□□□□ 0.25
CAPN1P07384 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.59■□□□□ 0.25
CAPN1P07384 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.59■□□□□ 0.25
CAPN1P07384 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CAPN1P07384 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CAPN1P07384 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms