Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
POLR3DP05423 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
POLR3DP05423 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 AL671277.1-201ENST00000429656 993 ntBASIC20.07■□□□□ 0.8
POLR3DP05423 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
POLR3DP05423 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.07■□□□□ 0.8
POLR3DP05423 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.07■□□□□ 0.8
POLR3DP05423 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
POLR3DP05423 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.07■□□□□ 0.8
POLR3DP05423 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.07■□□□□ 0.8
POLR3DP05423 DUX4L17-201ENST00000557360 1267 ntBASIC20.07■□□□□ 0.8
POLR3DP05423 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 AC105339.1-204ENST00000636249 355 ntBASIC20.07■□□□□ 0.8
POLR3DP05423 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
POLR3DP05423 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
POLR3DP05423 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR3DP05423 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.07■□□□□ 0.8
POLR3DP05423 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.07■□□□□ 0.8
POLR3DP05423 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
POLR3DP05423 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR3DP05423 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR3DP05423 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.06■□□□□ 0.8
POLR3DP05423 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 HCG4-201ENST00000418983 998 ntBASIC20.06■□□□□ 0.8
POLR3DP05423 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
POLR3DP05423 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR3DP05423 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR3DP05423 AC099522.2-201ENST00000607001 744 ntBASIC20.06■□□□□ 0.8
POLR3DP05423 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.06■□□□□ 0.8
POLR3DP05423 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR3DP05423 SLC22A20-204ENST00000530038 1673 ntBASIC20.06■□□□□ 0.8
POLR3DP05423 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR3DP05423 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
POLR3DP05423 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
POLR3DP05423 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 AC091167.2-201ENST00000579581 588 ntBASIC20.05■□□□□ 0.8
POLR3DP05423 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR3DP05423 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 AL513210.1-201ENST00000629608 234 ntBASIC20.05■□□□□ 0.8
POLR3DP05423 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
POLR3DP05423 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 AL121761.2-201ENST00000598007 1648 ntBASIC20.05■□□□□ 0.8
POLR3DP05423 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR3DP05423 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR3DP05423 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms