Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HLA-DPB1P04440 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC024909.3-201ENST00000611513 2257 ntBASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 NPAP1P7-201ENST00000613027 823 ntBASIC15.18■□□□□ 0.02
HLA-DPB1P04440 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 AL391256.1-201ENST00000443260 1855 ntBASIC15.18■□□□□ 0.02
HLA-DPB1P04440 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.18■□□□□ 0.02
HLA-DPB1P04440 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 NORAD-201ENST00000565493 5339 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 DRAXINP1-201ENST00000437611 948 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 MIR3180-1-201ENST00000580374 94 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AP005901.3-202ENST00000581653 237 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 MIR3180-3-201ENST00000584616 94 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 AC005336.2-201ENST00000593183 939 ntBASIC15.17■□□□□ 0.02
HLA-DPB1P04440 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPB1P04440 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms