Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DHFRP00374 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.63□□□□□ -0.07
DHFRP00374 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
DHFRP00374 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.62□□□□□ -0.07
DHFRP00374 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
DHFRP00374 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
DHFRP00374 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
DHFRP00374 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.62□□□□□ -0.07
DHFRP00374 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 AL391256.1-201ENST00000443260 1855 ntBASIC14.62□□□□□ -0.07
DHFRP00374 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 AL353719.1-201ENST00000566847 864 ntBASIC14.62□□□□□ -0.07
DHFRP00374 MIR4497-201ENST00000583208 89 ntBASIC14.62□□□□□ -0.07
DHFRP00374 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.62□□□□□ -0.07
DHFRP00374 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.62□□□□□ -0.07
DHFRP00374 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.62□□□□□ -0.07
DHFRP00374 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.62□□□□□ -0.07
DHFRP00374 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
DHFRP00374 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
DHFRP00374 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
DHFRP00374 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
DHFRP00374 MIR1238-201ENST00000408483 83 ntBASIC14.61□□□□□ -0.07
DHFRP00374 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.61□□□□□ -0.07
DHFRP00374 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 AP000525.1-201ENST00000608286 694 ntBASIC14.61□□□□□ -0.07
DHFRP00374 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
DHFRP00374 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 ME2P1-201ENST00000426028 1970 ntBASIC14.61□□□□□ -0.07
DHFRP00374 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
DHFRP00374 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.61□□□□□ -0.07
DHFRP00374 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
DHFRP00374 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms