Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.59■□□□□ 0.09
CLIC3O95833 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.59■□□□□ 0.09
CLIC3O95833 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC3O95833 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC3O95833 AC233702.5-201ENST00000584107 538 ntBASIC15.59■□□□□ 0.09
CLIC3O95833 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC3O95833 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC3O95833 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLIC3O95833 AC097374.2-201ENST00000618617 1306 ntBASIC15.59■□□□□ 0.09
CLIC3O95833 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 AC022532.1-201ENST00000624563 1728 ntBASIC15.59■□□□□ 0.09
CLIC3O95833 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.59■□□□□ 0.09
CLIC3O95833 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.59■□□□□ 0.09
CLIC3O95833 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLIC3O95833 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CLIC3O95833 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CLIC3O95833 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.58■□□□□ 0.09
CLIC3O95833 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLIC3O95833 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.58■□□□□ 0.08
CLIC3O95833 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.58■□□□□ 0.08
CLIC3O95833 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.58■□□□□ 0.08
CLIC3O95833 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.58■□□□□ 0.08
CLIC3O95833 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.58■□□□□ 0.08
CLIC3O95833 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.58■□□□□ 0.08
CLIC3O95833 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.58■□□□□ 0.08
CLIC3O95833 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLIC3O95833 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CLIC3O95833 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLIC3O95833 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.58■□□□□ 0.08
CLIC3O95833 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLIC3O95833 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLIC3O95833 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.57■□□□□ 0.08
CLIC3O95833 AL596275.1-201ENST00000423464 877 ntBASIC15.57■□□□□ 0.08
CLIC3O95833 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.57■□□□□ 0.08
CLIC3O95833 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.57■□□□□ 0.08
CLIC3O95833 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.57■□□□□ 0.08
CLIC3O95833 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.57■□□□□ 0.08
CLIC3O95833 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.57■□□□□ 0.08
CLIC3O95833 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLIC3O95833 AL136038.4-201ENST00000603606 1261 ntBASIC15.57■□□□□ 0.08
CLIC3O95833 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.57■□□□□ 0.08
CLIC3O95833 SNX18-202ENST00000343017 3140 ntBASIC15.57■□□□□ 0.08
CLIC3O95833 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 AL049757.1-201ENST00000616842 1596 ntBASIC15.57■□□□□ 0.08
CLIC3O95833 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CLIC3O95833 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
CLIC3O95833 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLIC3O95833 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms