Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
UPK1BO75841 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1BO75841 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1BO75841 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 KRT16P1-201ENST00000399124 1418 ntBASIC14.67□□□□□ -0.06
UPK1BO75841 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 AC005840.4-201ENST00000541242 2494 ntBASIC14.67□□□□□ -0.06
UPK1BO75841 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 AP002982.1-201ENST00000492365 877 ntBASIC14.67□□□□□ -0.06
UPK1BO75841 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 AC020658.6-201ENST00000623564 1870 ntBASIC14.67□□□□□ -0.06
UPK1BO75841 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
UPK1BO75841 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UPK1BO75841 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.67□□□□□ -0.06
UPK1BO75841 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 LINC00895-201ENST00000629028 1637 ntBASIC14.66□□□□□ -0.06
UPK1BO75841 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.66□□□□□ -0.06
UPK1BO75841 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.66□□□□□ -0.06
UPK1BO75841 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 B3GAT3P1-201ENST00000471720 806 ntBASIC14.66□□□□□ -0.06
UPK1BO75841 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
UPK1BO75841 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.66□□□□□ -0.06
UPK1BO75841 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1BO75841 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK1BO75841 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 336.3 ms