Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.78□□□□□ -0.2
SSSCA1O60232 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.78□□□□□ -0.2
SSSCA1O60232 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 AL161772.1-201ENST00000610494 4412 ntBASIC13.78□□□□□ -0.2
SSSCA1O60232 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSSCA1O60232 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.78□□□□□ -0.2
SSSCA1O60232 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 AL356309.3-201ENST00000624132 1934 ntBASIC13.78□□□□□ -0.2
SSSCA1O60232 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.78□□□□□ -0.2
SSSCA1O60232 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSSCA1O60232 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SSSCA1O60232 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SSSCA1O60232 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.77□□□□□ -0.2
SSSCA1O60232 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSSCA1O60232 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SSSCA1O60232 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SSSCA1O60232 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSSCA1O60232 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSSCA1O60232 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.77□□□□□ -0.21
SSSCA1O60232 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.77□□□□□ -0.21
SSSCA1O60232 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 STK25P1-201ENST00000585406 838 ntBASIC13.77□□□□□ -0.21
SSSCA1O60232 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SSSCA1O60232 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
SSSCA1O60232 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SSSCA1O60232 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.77□□□□□ -0.21
SSSCA1O60232 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSSCA1O60232 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 AL049757.1-201ENST00000616842 1596 ntBASIC13.76□□□□□ -0.21
SSSCA1O60232 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SSSCA1O60232 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SSSCA1O60232 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SSSCA1O60232 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSSCA1O60232 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms