Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PFDN6O15212 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.89■□□□□ 0.29
PFDN6O15212 AF186996.4-201ENST00000467186 377 ntBASIC16.89■□□□□ 0.29
PFDN6O15212 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.89■□□□□ 0.29
PFDN6O15212 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.89■□□□□ 0.29
PFDN6O15212 AC025062.2-201ENST00000605477 670 ntBASIC16.89■□□□□ 0.29
PFDN6O15212 PGM5P2-202ENST00000637225 1043 ntBASIC16.89■□□□□ 0.29
PFDN6O15212 AL805961.1-202ENST00000641562 540 ntBASIC16.89■□□□□ 0.29
PFDN6O15212 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.89■□□□□ 0.29
PFDN6O15212 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.89■□□□□ 0.29
PFDN6O15212 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.89■□□□□ 0.29
PFDN6O15212 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN6O15212 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PFDN6O15212 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.88■□□□□ 0.29
PFDN6O15212 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.88■□□□□ 0.29
PFDN6O15212 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.88■□□□□ 0.29
PFDN6O15212 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 AL691432.3-201ENST00000621860 400 ntBASIC16.88■□□□□ 0.29
PFDN6O15212 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 PCDHB17P-201ENST00000539533 2393 ntBASIC16.88■□□□□ 0.29
PFDN6O15212 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
PFDN6O15212 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
PFDN6O15212 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PFDN6O15212 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
PFDN6O15212 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 TOP3BP1-201ENST00000420768 1380 ntBASIC16.88■□□□□ 0.29
PFDN6O15212 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
PFDN6O15212 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN6O15212 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.88■□□□□ 0.29
PFDN6O15212 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.87■□□□□ 0.29
PFDN6O15212 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PFDN6O15212 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 AC004870.1-201ENST00000315132 882 ntBASIC16.87■□□□□ 0.29
PFDN6O15212 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.87■□□□□ 0.29
PFDN6O15212 PAWRP1-201ENST00000451083 565 ntBASIC16.87■□□□□ 0.29
PFDN6O15212 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.87■□□□□ 0.29
PFDN6O15212 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.87■□□□□ 0.29
PFDN6O15212 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PFDN6O15212 AL121912.1-201ENST00000603683 238 ntBASIC16.87■□□□□ 0.29
PFDN6O15212 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 LINC00895-201ENST00000629028 1637 ntBASIC16.87■□□□□ 0.29
PFDN6O15212 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.87■□□□□ 0.29
PFDN6O15212 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.87■□□□□ 0.29
PFDN6O15212 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PFDN6O15212 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PFDN6O15212 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
PFDN6O15212 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms