Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 LTB4R2-202ENST00000528054 3092 ntBASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA3F8WFD2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AP001094.4-201ENST00000579008 2176 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SLC25A1P3-201ENST00000395415 828 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AC092902.6-201ENST00000641783 218 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 AC012313.1-201ENST00000593393 3059 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA3F8WFD2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 HMGN1P19-201ENST00000436976 333 ntBASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 AC112191.1-201ENST00000523689 701 ntBASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA3F8WFD2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPA3F8WFD2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms