Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
NPIPA2E9PIF3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 AC092919.2-201ENST00000623631 1645 ntBASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 LTB4R2-202ENST00000528054 3092 ntBASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPIPA2E9PIF3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AP001094.4-201ENST00000579008 2176 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AC092902.6-201ENST00000641783 218 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 AC012313.1-201ENST00000593393 3059 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPA2E9PIF3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 HMGN1P19-201ENST00000436976 333 ntBASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 AC112191.1-201ENST00000523689 701 ntBASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPA2E9PIF3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms