Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
B4DXG7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.66■□□□□ 0.1
B4DXG7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
B4DXG7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
B4DXG7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
B4DXG7 EGFEM1P-202ENST00000431685 1563 ntBASIC15.66■□□□□ 0.1
B4DXG7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
B4DXG7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
B4DXG7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.65■□□□□ 0.1
B4DXG7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 CROCCP1-201ENST00000426910 5675 ntBASIC15.65■□□□□ 0.1
B4DXG7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
B4DXG7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 RPS15P9-201ENST00000494093 319 ntBASIC15.65■□□□□ 0.1
B4DXG7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.65■□□□□ 0.1
B4DXG7 RNA5SP415-201ENST00000517246 115 ntBASIC15.65■□□□□ 0.1
B4DXG7 UNC93B6-202ENST00000528242 690 ntBASIC15.65■□□□□ 0.1
B4DXG7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.65■□□□□ 0.1
B4DXG7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.65■□□□□ 0.1
B4DXG7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 AC120114.3-201ENST00000611923 658 ntBASIC15.65■□□□□ 0.1
B4DXG7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.65■□□□□ 0.1
B4DXG7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
B4DXG7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
B4DXG7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.65■□□□□ 0.1
B4DXG7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.65■□□□□ 0.1
B4DXG7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.64■□□□□ 0.1
B4DXG7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 AC009947.1-201ENST00000444350 727 ntBASIC15.64■□□□□ 0.09
B4DXG7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.64■□□□□ 0.09
B4DXG7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 TERC-201ENST00000602385 541 ntBASIC15.64■□□□□ 0.09
B4DXG7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 AL805961.1-202ENST00000641562 540 ntBASIC15.64■□□□□ 0.09
B4DXG7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
B4DXG7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
B4DXG7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.64■□□□□ 0.09
B4DXG7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
B4DXG7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
B4DXG7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
B4DXG7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.63■□□□□ 0.09
B4DXG7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
B4DXG7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.63■□□□□ 0.09
B4DXG7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.63■□□□□ 0.09
B4DXG7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.63■□□□□ 0.09
B4DXG7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
B4DXG7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms