Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 IGHV3-52-201ENST00000519770 353 ntBASIC18.31■□□□□ 0.52
CCDC66A2RUB6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AC019129.2-201ENST00000609837 1235 ntBASIC18.31■□□□□ 0.52
CCDC66A2RUB6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AL009178.2-201ENST00000597278 2719 ntBASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC66A2RUB6 CICP13-201ENST00000422015 2789 ntBASIC18.3■□□□□ 0.52
CCDC66A2RUB6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AC104581.4-201ENST00000623126 3052 ntBASIC18.3■□□□□ 0.52
CCDC66A2RUB6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AC007967.3-201ENST00000434308 558 ntBASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AC092647.4-201ENST00000457211 535 ntBASIC18.3■□□□□ 0.52
CCDC66A2RUB6 RN7SL850P-201ENST00000579959 291 ntBASIC18.3■□□□□ 0.52
CCDC66A2RUB6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC66A2RUB6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 TMPOP1-202ENST00000424642 1267 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms