Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AL645728.1-201ENST00000366221 2101 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC091167.2-201ENST00000579581 588 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC005412.3-201ENST00000580309 715 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AL353732.1-201ENST00000569618 1459 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC006277.1-201ENST00000624348 1610 ntBASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AL391256.1-201ENST00000443260 1855 ntBASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 YBX2P1-201ENST00000394192 760 ntBASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC004832.2-201ENST00000426397 482 ntBASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF12-TNFSF13A0A0A6YY99 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms