Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 AL662844.4-201ENST00000606367 2838 ntBASIC20.3■□□□□ 0.84
DDX49Q9Y6V7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AC078925.2-201ENST00000624013 1973 ntBASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 NKAPP1-205ENST00000585790 367 ntBASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 LINC02012-201ENST00000608206 1725 ntBASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX49Q9Y6V7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 AC092053.1-201ENST00000605787 1936 ntBASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX49Q9Y6V7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 BX005266.1-201ENST00000473402 457 ntBASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AC092910.1-201ENST00000482027 1129 ntBASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AC139530.3-201ENST00000620344 690 ntBASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX49Q9Y6V7 AL356309.3-201ENST00000624132 1934 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms