Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB13Q9Y5F0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PCDHB13Q9Y5F0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHB13Q9Y5F0 FLJ38576-201ENST00000623820 2459 ntBASIC18.64■□□□□ 0.58
PCDHB13Q9Y5F0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 OR7E47P-204ENST00000575924 449 ntBASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB13Q9Y5F0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 AC107918.2-201ENST00000530817 355 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 MIR4751-201ENST00000578027 74 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 Z83851.2-201ENST00000609564 659 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 IL9RP2-201ENST00000423948 1312 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 LINC00895-201ENST00000629028 1637 ntBASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB13Q9Y5F0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AL645728.1-201ENST00000366221 2101 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AP000568.1-201ENST00000282964 442 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 CRYGEP-201ENST00000412192 528 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AL590627.1-203ENST00000421194 1026 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 VN2R19P-201ENST00000442399 1052 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AC145285.3-201ENST00000564603 959 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AC091167.2-201ENST00000579581 588 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 MPDU1-223ENST00000582151 728 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AC013467.2-201ENST00000605472 835 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 BX640515.1-201ENST00000617215 977 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AL391256.1-201ENST00000443260 1855 ntBASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB13Q9Y5F0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC078925.2-201ENST00000624013 1973 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms