Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.02■□□□□ 0.95
RTCBQ9Y3I0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTCBQ9Y3I0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RTCBQ9Y3I0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.02■□□□□ 0.95
RTCBQ9Y3I0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.02■□□□□ 0.95
RTCBQ9Y3I0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 MIR658-201ENST00000385210 100 ntBASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 AC044860.1-202ENST00000559481 777 ntBASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 AC116353.5-201ENST00000638148 1699 ntBASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTCBQ9Y3I0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 SPDYE18-201ENST00000510091 1050 ntBASIC21■□□□□ 0.95
RTCBQ9Y3I0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTCBQ9Y3I0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21■□□□□ 0.95
RTCBQ9Y3I0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 SLC7A15P-201ENST00000424028 1363 ntBASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.99■□□□□ 0.95
RTCBQ9Y3I0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 AC114501.2-201ENST00000439631 535 ntBASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTCBQ9Y3I0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms