Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA1Q9UND3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NPIPA1Q9UND3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA1Q9UND3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA1Q9UND3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA1Q9UND3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 AC080080.1-201ENST00000625121 2420 ntBASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA1Q9UND3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AC093525.9-201ENST00000624961 1746 ntBASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AL513480.1-201ENST00000451731 511 ntBASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA1Q9UND3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA1Q9UND3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms