Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 MMP23A-201ENST00000234610 1017 ntBASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 AC073912.3-201ENST00000624414 853 ntBASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBQLN2Q9UHD9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 MFAP1P1-201ENST00000442257 1255 ntBASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 AC023157.3-201ENST00000619086 2088 ntBASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 AC005089.1-201ENST00000619486 2241 ntBASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 AC133561.5-201ENST00000635547 218 ntBASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBQLN2Q9UHD9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 KRT8P50-201ENST00000562022 1438 ntBASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.27□□□□□ -0.12
UBQLN2Q9UHD9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 AC087499.1-201ENST00000418141 1075 ntBASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 AP000692.2-201ENST00000608391 879 ntBASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 DGCR10-201ENST00000609839 495 ntBASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 AC116407.2-201ENST00000613639 860 ntBASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms