Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 AC021097.1-201ENST00000607902 574 ntBASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.47■□□□□ 0.39
DNMT3BQ9UBC3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
DNMT3BQ9UBC3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.46■□□□□ 0.38
DNMT3BQ9UBC3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AP3S2-216ENST00000617003 1561 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC105233.2-201ENST00000523697 349 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AF228730.5-201ENST00000530288 346 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 RARRES2P9-201ENST00000565168 469 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC018529.1-201ENST00000613063 361 ntBASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DNMT3BQ9UBC3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DNMT3BQ9UBC3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms