Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 AL020989.1-201ENST00000422979 469 ntBASIC17.77■□□□□ 0.44
CD248Q9HCU0 AC136632.2-201ENST00000512891 861 ntBASIC17.77■□□□□ 0.44
CD248Q9HCU0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 PGM5P2-202ENST00000637225 1043 ntBASIC17.77■□□□□ 0.44
CD248Q9HCU0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CD248Q9HCU0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD248Q9HCU0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.77■□□□□ 0.43
CD248Q9HCU0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CD248Q9HCU0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.77■□□□□ 0.43
CD248Q9HCU0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD248Q9HCU0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 KRT18P2-201ENST00000447938 1258 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 RNA5SP416-201ENST00000516838 111 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 AL691403.2-201ENST00000618460 490 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CD248Q9HCU0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 FER1L4-210ENST00000615531 5998 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 LINC02228-204ENST00000642115 2962 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD248Q9HCU0 AL662844.4-201ENST00000606367 2838 ntBASIC17.76■□□□□ 0.43
CD248Q9HCU0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 ELK2BP-201ENST00000415014 1224 ntBASIC17.75■□□□□ 0.43
CD248Q9HCU0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 AC108751.1-201ENST00000490852 363 ntBASIC17.75■□□□□ 0.43
CD248Q9HCU0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MIR1199-201ENST00000621445 119 ntBASIC17.75■□□□□ 0.43
CD248Q9HCU0 AC005593.1-201ENST00000624894 515 ntBASIC17.75■□□□□ 0.43
CD248Q9HCU0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD248Q9HCU0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms