Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GPR53P-205ENST00000457298 1084 ntBASIC19.58■□□□□ 0.72
EFCC1Q9HA90 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 AC084121.4-201ENST00000641598 221 ntBASIC19.58■□□□□ 0.72
EFCC1Q9HA90 AF228730.8-201ENST00000642140 221 ntBASIC19.58■□□□□ 0.72
EFCC1Q9HA90 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 AC090164.3-201ENST00000610780 2143 ntBASIC19.58■□□□□ 0.72
EFCC1Q9HA90 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EFCC1Q9HA90 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 AL596257.1-201ENST00000641463 2694 ntBASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 U91328.1-201ENST00000437528 223 ntBASIC19.57■□□□□ 0.72
EFCC1Q9HA90 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
EFCC1Q9HA90 AC018695.7-201ENST00000624587 2492 ntBASIC19.57■□□□□ 0.72
EFCC1Q9HA90 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 AC138028.4-201ENST00000564984 1845 ntBASIC19.56■□□□□ 0.72
EFCC1Q9HA90 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCC1Q9HA90 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.56■□□□□ 0.72
EFCC1Q9HA90 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 GNAS-203ENST00000306120 1878 ntBASIC19.55■□□□□ 0.72
EFCC1Q9HA90 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.55■□□□□ 0.72
EFCC1Q9HA90 MIR4515-201ENST00000584082 81 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms