Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AP000867.4-201ENST00000641616 219 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC144831.1-201ENST00000573312 2656 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 BX005266.1-201ENST00000473402 457 ntBASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 AC019129.2-201ENST00000609837 1235 ntBASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 AD001527.2-201ENST00000622994 785 ntBASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 AC005915.1-201ENST00000624912 2018 ntBASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIN28AQ9H9Z2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 RBM17P3-201ENST00000417687 1192 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 AC103564.2-201ENST00000432853 1299 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 NKAPP1-205ENST00000585790 367 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 SLC25A6P4-201ENST00000586535 553 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 AC073592.5-201ENST00000624854 528 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LIN28AQ9H9Z2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN28AQ9H9Z2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN28AQ9H9Z2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN28AQ9H9Z2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LIN28AQ9H9Z2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIN28AQ9H9Z2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms