Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 HMGN1P19-201ENST00000436976 333 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 CYMP-203ENST00000474680 1263 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC079140.1-201ENST00000508039 487 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC109635.5-201ENST00000533593 962 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 AC093028.1-201ENST00000622998 982 ntBASIC16.29■□□□□ 0.2
SLC38A3Q99624 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC38A3Q99624 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC38A3Q99624 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 AC092474.2-201ENST00000424288 719 ntBASIC16.28■□□□□ 0.2
SLC38A3Q99624 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 IGHV3-62-201ENST00000520057 340 ntBASIC16.28■□□□□ 0.2
SLC38A3Q99624 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 AC025678.2-201ENST00000562061 970 ntBASIC16.28■□□□□ 0.2
SLC38A3Q99624 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 LINC00628-201ENST00000628516 1289 ntBASIC16.28■□□□□ 0.2
SLC38A3Q99624 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC38A3Q99624 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC38A3Q99624 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 AL139400.1-201ENST00000366220 510 ntBASIC16.27■□□□□ 0.2
SLC38A3Q99624 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 RNU1-129P-201ENST00000384064 167 ntBASIC16.27■□□□□ 0.2
SLC38A3Q99624 PMS2P4-201ENST00000412466 1052 ntBASIC16.27■□□□□ 0.2
SLC38A3Q99624 AL627223.1-201ENST00000416693 442 ntBASIC16.27■□□□□ 0.2
SLC38A3Q99624 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC38A3Q99624 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC38A3Q99624 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms