Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AL353807.1-201ENST00000427475 662 ntBASIC15.9■□□□□ 0.14
NR1H4Q96RI1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AC011298.2-201ENST00000617989 482 ntBASIC15.9■□□□□ 0.14
NR1H4Q96RI1 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AL031985.4-201ENST00000642138 673 ntBASIC15.9■□□□□ 0.14
NR1H4Q96RI1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NR1H4Q96RI1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 EGFEM1P-202ENST00000431685 1563 ntBASIC15.89■□□□□ 0.13
NR1H4Q96RI1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AL353708.3-201ENST00000610272 989 ntBASIC15.89■□□□□ 0.13
NR1H4Q96RI1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CICP24-201ENST00000605464 2705 ntBASIC15.89■□□□□ 0.13
NR1H4Q96RI1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.89■□□□□ 0.13
NR1H4Q96RI1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NR1H4Q96RI1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms