Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 MIR943-201ENST00000401286 94 ntBASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 AC069262.1-201ENST00000539058 672 ntBASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 AL096865.1-201ENST00000606796 927 ntBASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 AP001059.3-201ENST00000619053 235 ntBASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC85AQ96PX6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC85AQ96PX6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 CNN2P2-201ENST00000443536 909 ntBASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 CNN2P3-201ENST00000450201 906 ntBASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC051619.7-201ENST00000568314 623 ntBASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AP000842.3-202ENST00000569238 1080 ntBASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AL136317.3-201ENST00000618497 906 ntBASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC85AQ96PX6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PKD1P1-201ENST00000458669 6805 ntBASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PMS2P4-201ENST00000412466 1052 ntBASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 PCDHB17P-201ENST00000539533 2393 ntBASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 AC012313.1-201ENST00000593393 3059 ntBASIC20.81■□□□□ 0.92
CCDC85AQ96PX6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms