Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AL031432.2-201ENST00000566714 459 ntBASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AL928711.1-201ENST00000570165 459 ntBASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 AL671883.3-201ENST00000603274 991 ntBASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 HLA-A-202ENST00000376806 1854 ntBASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GAFA1Q96PS6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HMGA1P7-201ENST00000406908 502 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 HLA-J-202ENST00000469281 1241 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 POLD2P1-201ENST00000511220 997 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 KRT19P2-202ENST00000557173 1012 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 AL671710.1-201ENST00000610245 2349 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 AC025580.3-201ENST00000617932 1424 ntBASIC13.98□□□□□ -0.17
GAFA1Q96PS6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GAFA1Q96PS6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 AC006538.1-201ENST00000567905 1585 ntBASIC13.97□□□□□ -0.17
GAFA1Q96PS6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.97□□□□□ -0.17
GAFA1Q96PS6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.97□□□□□ -0.17
GAFA1Q96PS6 AL513190.1-201ENST00000621254 727 ntBASIC13.97□□□□□ -0.17
GAFA1Q96PS6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms