Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 LINC00554-201ENST00000564841 3011 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 AC104109.2-201ENST00000602919 1418 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 AC092910.1-201ENST00000482027 1129 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 AL589182.2-201ENST00000619332 1049 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 PGM5P2-202ENST00000637225 1043 ntBASIC17.41■□□□□ 0.38
IFT43Q96FT9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.41■□□□□ 0.38
IFT43Q96FT9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT43Q96FT9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 GPR89P-201ENST00000407924 1495 ntBASIC17.4■□□□□ 0.38
IFT43Q96FT9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 RNA5SP415-201ENST00000517246 115 ntBASIC17.4■□□□□ 0.38
IFT43Q96FT9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 AC034105.1-201ENST00000563488 319 ntBASIC17.4■□□□□ 0.38
IFT43Q96FT9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 AC006557.2-201ENST00000592985 1240 ntBASIC17.4■□□□□ 0.38
IFT43Q96FT9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
IFT43Q96FT9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IFT43Q96FT9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
IFT43Q96FT9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFT43Q96FT9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFT43Q96FT9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFT43Q96FT9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFT43Q96FT9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IFT43Q96FT9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 BX842568.4-201ENST00000421222 227 ntBASIC17.39■□□□□ 0.37
IFT43Q96FT9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.39■□□□□ 0.37
IFT43Q96FT9 AC105020.1-201ENST00000435356 2205 ntBASIC17.39■□□□□ 0.37
IFT43Q96FT9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms