Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 CNN2P2-201ENST00000443536 909 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 CNN2P3-201ENST00000450201 906 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AL512356.2-201ENST00000546955 174 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AC124947.2-201ENST00000547118 1133 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 LINC01225-203ENST00000563550 1244 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AL136317.3-201ENST00000618497 906 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AP001059.3-201ENST00000619053 235 ntBASIC18.2■□□□□ 0.5
PGBD4Q96DM1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PGBD4Q96DM1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 FAM58DP-201ENST00000428076 619 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 RBPMS2P1-201ENST00000437762 623 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CYP2A7P1-201ENST00000595391 815 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 AC021097.1-201ENST00000607902 574 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 LINC02012-201ENST00000608206 1725 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 Z92544.3-201ENST00000624747 417 ntBASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
PGBD4Q96DM1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 MIR3197-201ENST00000582241 73 ntBASIC18.18■□□□□ 0.5
PGBD4Q96DM1 AC092364.2-202ENST00000597012 1073 ntBASIC18.18■□□□□ 0.5
PGBD4Q96DM1 AC008267.7-201ENST00000624570 1194 ntBASIC18.18■□□□□ 0.5
PGBD4Q96DM1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PGBD4Q96DM1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms