Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 RPS2P28-201ENST00000314255 741 ntBASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC091167.2-201ENST00000579581 588 ntBASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 AC104692.2-201ENST00000603054 253 ntBASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 FAM215A-202ENST00000632077 792 ntBASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RHBDF1Q96CC6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RHBDF1Q96CC6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RHBDF1Q96CC6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 KRT126P-201ENST00000549467 1181 ntBASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 PGM5P2-202ENST00000637225 1043 ntBASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 SLC22A20-204ENST00000530038 1673 ntBASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 AC131009.4-201ENST00000624048 1740 ntBASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RHBDF1Q96CC6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 OR6D1P-203ENST00000641209 4860 ntBASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PMS2P1-201ENST00000431037 1228 ntBASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AP002469.2-201ENST00000531724 424 ntBASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 AC005593.1-201ENST00000624894 515 ntBASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RHBDF1Q96CC6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms