Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 YBX2P1-201ENST00000394192 760 ntBASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SH3KBP1Q96B97 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SH3KBP1Q96B97 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SH3KBP1Q96B97 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
SH3KBP1Q96B97 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 AC023274.1-201ENST00000418278 595 ntBASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 KRT18P2-201ENST00000447938 1258 ntBASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 AC096734.2-201ENST00000562054 433 ntBASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SH3KBP1Q96B97 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms