Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 TNXA-203ENST00000507684 2038 ntBASIC16.61■□□□□ 0.25
CLDN23Q96B33 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN23Q96B33 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN23Q96B33 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC116353.5-201ENST00000638148 1699 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC007389.4-201ENST00000454674 793 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC123567.1-201ENST00000548294 1261 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC023310.3-201ENST00000557027 670 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC100756.1-201ENST00000562736 682 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC138749.3-201ENST00000567691 622 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC116165.1-201ENST00000611806 668 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 AC004461.2-201ENST00000629517 803 ntBASIC16.6■□□□□ 0.25
CLDN23Q96B33 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN23Q96B33 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN23Q96B33 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC087289.5-201ENST00000586076 3175 ntBASIC16.59■□□□□ 0.25
CLDN23Q96B33 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN23Q96B33 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN23Q96B33 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms