Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 AC013467.2-201ENST00000605472 835 ntBASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 AL023973.1-201ENST00000624619 620 ntBASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.77■□□□□ 0.28
CKAP2Q8WWK9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CKAP2Q8WWK9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 SPDYE15P-201ENST00000424157 909 ntBASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AC005332.3-201ENST00000589904 676 ntBASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AL390719.2-201ENST00000606993 987 ntBASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AC006277.1-201ENST00000624348 1610 ntBASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CKAP2Q8WWK9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 FAM220CP-201ENST00000395253 831 ntBASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 AC092597.1-201ENST00000487352 616 ntBASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 AL138966.2-201ENST00000621997 464 ntBASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CKAP2Q8WWK9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms